OMOP_5.4_ER_ALL

OMOP_5.4_ER : Model

Entity - cdm_source link

Properties
Name Value
Description

 

CDM_SOURCE

Table Description

The CDM_SOURCE table contains detail about the source database and the process used to transform the data into the OMOP Common Data Model.

CDM Field User Guide ETL Conventions Datatype Required Primary Key Foreign Key FK Table FK Domain
cdm_source_name The name of the CDM instance. varchar(255) Yes No No
cdm_source_abbreviation The abbreviation of the CDM instance. varchar(25) Yes No No
cdm_holder The holder of the CDM instance. varchar(255) Yes No No
source_description The description of the CDM instance. varchar(MAX) No No No
source_documentation_reference varchar(255) No No No
cdm_etl_reference Put the link to the CDM version used. varchar(255) No No No
source_release_date The release date of the source data. date Yes No No
cdm_release_date The release data of the CDM instance. date Yes No No
cdm_version varchar(10) No No No
cdm_version_concept_id The Concept Id representing the version of the CDM. You can find all concepts that represent the CDM versions using the query: SELECT * FROM CONCEPT WHERE VOCABULARY_ID = ‘CDM’ AND CONCEPT_CLASS = ‘CDM’ integer Yes No Yes CONCEPT
vocabulary_version You can find the version of your Vocabulary using the query: SELECT vocabulary_version from vocabulary where vocabulary_id = ‘None’ varchar(20) Yes No No

Data Model Physical
Primary Key Clustered Unspecified
Unlogged false

Columns Summary
Column Name Data Type PK / FK Nullable Description
cdm_source_name varchar(255) No
cdm_source_abbreviation varchar(25) No
cdm_holder varchar(255) No
source_description text Yes
source_documentation_reference varchar(255) Yes
cdm_etl_reference varchar(255) Yes
source_release_date date No
cdm_release_date date No
cdm_version varchar(10) Yes
cdm_version_concept_id int4 PK / FK No
vocabulary_version varchar(20) No

Relationships Summary
Name Begin End
 fpk_cdm_source_cdm_version_concept_id : Relationship
 concept : Entity
 cdm_source : Entity

Columns Detail
Name Value
Name cdm_source_name
Type varchar
Nullable false
Unique false
Primary Key false
Index false
Type Name varchar
Length 255
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name cdm_source_abbreviation
Type varchar
Nullable false
Unique false
Primary Key false
Index false
Type Name varchar
Length 25
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name cdm_holder
Type varchar
Nullable false
Unique false
Primary Key false
Index false
Type Name varchar
Length 255
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name source_description
Type text
Nullable true
Unique false
Primary Key false
Index false
Type Name text
Length 0
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name source_documentation_reference
Type varchar
Nullable true
Unique false
Primary Key false
Index false
Type Name varchar
Length 255
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name cdm_etl_reference
Type varchar
Nullable true
Unique false
Primary Key false
Index false
Type Name varchar
Length 255
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name source_release_date
Type date
Nullable false
Unique false
Primary Key false
Index false
Type Name date
Length 0
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name cdm_release_date
Type date
Nullable false
Unique false
Primary Key false
Index false
Type Name date
Length 0
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name cdm_version
Type varchar
Nullable true
Unique false
Primary Key false
Index false
Type Name varchar
Length 10
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name cdm_version_concept_id
Type int4
Nullable false
Unique false
Primary Key true
Index false
Length 0
Scale 0
Id Generator native
Foreign Key true
Generated Unspecified
Sync To Attribute Yes

Name Value
Name vocabulary_version
Type varchar
Nullable false
Unique false
Primary Key false
Index false
Type Name varchar
Length 20
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Relationships Detail
Name Value
Name fpk_cdm_source_cdm_version_concept_id
Foreign Key
cdm_source
 cdm_version_concept_id : Column
Primary Key
concept
 concept_id : Column
To Multiplicity 0..*
From Multiplicity 0..1
Sync To Association Yes
Data Model Physical

Appears In
Diagram
 Standardized_Tables : Entity Relationship Diagram
 Vocabulary_With_Standard : Entity Relationship Diagram
OMOP_5.4_ER_ALL