OMOP_5.4_ER_ALL

OMOP_5.4_ER : Model

Entity - vocabulary link

Properties
Name Value
Description

 

VOCABULARY

Table Description

The VOCABULARY table includes a list of the Vocabularies collected from various sources or created de novo by the OMOP community. This reference table is populated with a single record for each Vocabulary source and includes a descriptive name and other associated attributes for the Vocabulary.

CDM Field User Guide ETL Conventions Datatype Required Primary Key Foreign Key FK Table FK Domain
vocabulary_id A unique identifier for each Vocabulary, such as ICD9CM, SNOMED, Visit. varchar(20) Yes Yes No
vocabulary_name The name describing the vocabulary, for example, International Classification of Diseases, Ninth Revision, Clinical Modification, Volume 1 and 2 (NCHS) etc. varchar(255) Yes No No
vocabulary_reference External reference to documentation or available download of the about the vocabulary. varchar(255) No No No
vocabulary_version Version of the Vocabulary as indicated in the source. varchar(255) No No No
vocabulary_concept_id A Concept that represents the Vocabulary the VOCABULARY record belongs to. integer Yes No Yes CONCEPT

Data Model Physical
Primary Key Constraint Name xpk_vocabulary
Primary Key Clustered Unspecified
Unlogged false

Columns Summary
Column Name Data Type PK / FK Nullable Description
vocabulary_id varchar(20) PK No
vocabulary_concept_id int4 FK No
vocabulary_name varchar(255) No
vocabulary_reference varchar(255) Yes
vocabulary_version varchar(255) Yes

Relationships Summary
Name Begin End
 fpk_concept_vocabulary_id : Relationship
 vocabulary : Entity
 concept : Entity
 fpk_source_to_concept_map_target_vocabulary_id : Relationship
 vocabulary : Entity
 source_to_concept_map : Entity
 fpk_vocabulary_vocabulary_concept_id : Relationship
 concept : Entity
 vocabulary : Entity

Columns Detail
Name Value
Name vocabulary_id
Type varchar
Nullable false
Unique false
Primary Key true
Index false
Type Name varchar
Length 20
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name vocabulary_concept_id
Type int4
Nullable false
Unique false
Primary Key false
Index false
Length 0
Scale 0
Id Generator native
Foreign Key true
Generated Unspecified
Sync To Attribute Yes

Name Value
Name vocabulary_name
Type varchar
Nullable false
Unique false
Primary Key false
Index false
Type Name varchar
Length 255
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name vocabulary_reference
Type varchar
Nullable true
Unique false
Primary Key false
Index false
Type Name varchar
Length 255
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Name Value
Name vocabulary_version
Type varchar
Nullable true
Unique false
Primary Key false
Index false
Type Name varchar
Length 255
Scale 0
Id Generator native
Foreign Key false
Generated Unspecified
Sync To Attribute Yes

Relationships Detail
Name Value
Name fpk_concept_vocabulary_id
Foreign Key
concept
 vocabulary_id : Column
Primary Key
vocabulary
 vocabulary_id : Column
To Multiplicity 0..*
From Multiplicity 1
Sync To Association Yes
Data Model Physical

Name Value
Name fpk_source_to_concept_map_target_vocabulary_id
Foreign Key
source_to_concept_map
 target_vocabulary_id : Column
Primary Key
vocabulary
 vocabulary_id : Column
To Multiplicity 0..*
From Multiplicity 1
Sync To Association Yes
Data Model Physical

Name Value
Name fpk_vocabulary_vocabulary_concept_id
Foreign Key
vocabulary
 vocabulary_concept_id : Column
Primary Key
concept
 concept_id : Column
To Multiplicity 0..*
From Multiplicity 0..1
Sync To Association Yes
Data Model Physical

Appears In
Diagram
 Vocabulary_With_Standard : Entity Relationship Diagram
 Vocabulary_Tables : Entity Relationship Diagram
OMOP_5.4_ER_ALL